Ensembl Download and Documentation

	Ensembl Downloads
	Overview Before downloading and installing the Ensembl data and software we strongly encourage you to first read the documentation.   Ensembl tutorial   Ensembl Website Install instructions The software which provides Perl-based Object access to the database is available via anonymous CVS (see website install docs for details)    WebCVS FTP Downloads All of the data generated by the Ensembl project is freely available to download from our FTP site (ftp://ftp.ensembl.org/pub/release-31/) in the following format files:    DNA - Fasta files containing sequences associated with the assembly (contigs, chromosomes etc.).    Optionally RepeatMasked.    cDNA - Fasta files containing cDNA sequences for Ensembl/ab-initio predicted genes.    Peptides - Fasta files containing peptide sequences for Ensembl/ab-initio predicted genes.    EMBL - Ensembl database dumps in EMBL format    GenBank - Ensembl database dumps in GenBank format    MySQL - SQL dumps of Ensembl MySQL databases; should be portable to any SQL database.   DNA cDNA Peptides EMBL GenBank MySQL Anopheles FTP FTP FTP FTP FTP FTP Honeybee FTP FTP FTP FTP FTP FTP Celegans FTP FTP FTP FTP FTP FTP Dog FTP FTP FTP FTP FTP FTP Ciona FTP FTP FTP FTP FTP FTP Zebrafish FTP FTP FTP FTP FTP FTP Fly FTP FTP FTP FTP FTP FTP Fugu FTP FTP FTP FTP FTP FTP Chicken FTP FTP FTP FTP FTP FTP Human FTP FTP FTP FTP FTP FTP Mouse FTP FTP FTP FTP FTP FTP Chimp FTP FTP FTP FTP FTP FTP Rat FTP FTP FTP FTP FTP FTP Scerevisiae FTP FTP FTP FTP FTP FTP Tetraodon FTP FTP FTP FTP FTP FTP Xtropicalis FTP FTP FTP FTP FTP FTP Help   Pop-up, context sensitive help with history and keyword search